CDS

Accession Number TCMCG057C13789
gbkey CDS
Protein Id XP_018476457.1
Location complement(join(25030238..25030336,25030677..25030806,25030922..25031036,25031168..25031201,25031292..25032148,25032247..25032383,25032651..25032789,25032901..25033810,25033901..25034000,25034233..25034285,25034422..25034471,25034565..25034662,25034780..25035041,25035153..25035276))
Gene LOC108847652
GeneID 108847652
Organism Raphanus sativus

Protein

Length 1035aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018620955.1
Definition PREDICTED: sister chromatid cohesion 1 protein 4-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category D
Description Sister chromatid cohesion 1 protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K06670        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04111        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04111        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000798        [VIEW IN EMBL-EBI]
GO:0000819        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007062        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008278        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070601        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTTTATTCGCAGTTTATATTAGCAAAGAAAGGACCACTTGGGACAATATGGATTGCTGCCCATTTGGAGAGGAAGCTTCGTAAGAATCAGGTCGCTGATACTGACATCGGTGTCTCCGTTGATTCTATTCTCTTTCCGGAAGCTCCAATCGCATTGCGATTGTCAAGTCATCTTCTCCTTGGTGTGGTTCGTATATATTCCAAAAAGGTGAACTACCTCTTTGATGATTGCAGCGAGGCTTTGCTTAAGGTAAAGCAAGCTTTCCGCTCCGCTGCCGTTGACCTGCCCCCGGAAGAATCCACAGCACCTTATCATTCAATTACGTTGCCTGAGACGTTTGATCTTGATGATTTTGAGCTTCCTGACAGTGAGATCTTCCAGGGTAATTACGTTGATCATCATGTTAGTACAAGAGAGCAGATCACCCTTCAGGACACCATGGATGGTGTTGTATACTCAACATCGCAATTTGGATTAGATGAGAGATTTGGTGATGGCGACACTTCTCAAGCTGCTTTGGAGCTTGAAGAGGAAGTATTTCAGGACAAGGATCTTATTGGATCTGATGATGAGGGAGTTCAAGGAACTGATCACAATGCGTATATGGATGCGGCAACACTGGAGATAAAGGATGATGTGGTAGGAGTTTCTGAAGCGACGCCCAGAGATTTCAACCAAGAGCAGGTTGAAGATCTTGCTATGAGGAATGAATTCAACGAAGACGCTCAAGCTCCTCAAACCCCTGGATTAGTCGAGGTGCCAAACTCGTCTAGTGTTAGAGACCAGCTGGCATGCGATGATCAAATGGAGGTAGATGATTTGAATGCAGAAGAAGAAGAAGGTAGGAAGGCCTCTGAAGAGCTGGATGCTAATGAGACGCATAAACCTGATCAAGACCTGCCTTCTGAATCCCCCATGGAGGTGGATACGTCGCTGATAGATGAAAAATCCAACGCACAAAACGAGCCGGAGGAGGAGAGAGCAGAGCATGTACATGTTACTACATCGCCATGTTGTTCTCACATCACCACCGAGGTGGAAGATCCTGGTCAAGTAGTCACCGAGGCAGGAACTGATGTTAATAATGTTGTAGCAGATAAGTCAGATGCTGTTCCCTCAGTTGAGTCTTCTGAAGTGCCTACAATGAATAACGCTGAGCAATGTCTATCCCAAGAACCAAAAGATCATGGAGAAGAGAACAATCATGTTGCCATTGCCACTGAGGTCAACCAGCAAACAGATTCTAGTATACCAGATGAGCAACTAAATGAAGCCCACGCAACTGATGAACAGTTGGGAAATCTTACTGGATCTACTGATTCTGATTTGCCTGCACCTGAAAAGGTATTAGCAGCACCTGAGAGACATGGGGATGAAACTGGTTTCATGGTTGAATCCACACCAGATAGAGAAGACCCTGGCGCACGCAACGAGGATGCAGGAAATAATAAAATTACTGGGAAAAAACGCACTTTTACTGAGAGCACCATAACAGCAGAAAGTCTGAACTCTGTTGAGTCAGTTGGGCTGATTCAGTCGAAGAGAACTGCAGATTCTGTTCCTGATGACGATGACTTGTTATCTTCTATCTTAGTTGGAAAGTCATCTTTTCTGAAGATGAGGTCTACCCCTGTGCTTGAAATAGCAACAACAAAACTGTCACGAGCTGCTCCTCGTTCCACTGCCACAAAGAGGAAGGTTCTAATGGATGACCCCATGGTCTTGCATGGAGATGTTATACGAGAACAGCTGACAAATACTGAAGGTATACGCCGCGTGCGAAAGAAGGCACCTTGCACCATTGCTGAAATCGTAATGCTTCAAAGGCAAGCTATGGAGGATGGACTCTTGAAGGAGCCAATACTCACTGGTATGTCAGTGGAATTAGTATCTCTACACAATGAGCCCTTTGATCTAAGAGGAATCAGAATAATCGAGAGTGATGACCGTCATGCTTCTTCTGTTGGACCGGTGGAAGATAATGAATGTGCTGTTAGGGCTGTGGAAGAAAATGCAACTGAAGAAGTCTCTGCTCCTCAAGCTCGTCCAGGTGGTTCTGAAGAGCAACCTGCTGAGGCTCTTACTCACCCACAAGACCAACAGGAAGAAGCGAAAGAGGATGATACCGAGCTTGGTGAAACAGCATGTGAGTTAGAAGCTTCAAAAGAAGGCGATGGAGCTGCTGATGAAGTTAATCTTGTAGTGAATGACCAGATAAGTCAAATGCCATCCGAGGACAAGCTCGATCATGTAGAGGATTTACAGGTGGAAGGGTACCATGAACACCATGATGGAAGGCTAGGAGGTGAAGATGTTTGTGCTGATCTTCAAGAAAAAAGTTGCAGTGGTGGTGTCATCGAAATTACTGAAGGCGACGCTGATCACAACGAGATTCTCAACGAGACAGACTTGAAAGTTGAAGTTGAGCTTCCAGGTGAAGATAAGAAGACGGATGCATCAGCTGAAGACTGCGAGATTGGGATAGATGACCAGACTCCACGCGATAACGCAGTTGGTTCTGTTGAAACTGAACGCTTAGAAGAAGCTGGTGAGTGTAGTAATTTGGGTTTGGAAAGTTTCAACGAACCTCTTGTGGAAGCAAATAATGATGGGGTGAATCATAACAACTACGAACCACACAATGAGATGTTTAATGAAGAGGCTTATATGCAAAGTGCACGAGATGCGGAAGCTCTTTCTGGCGATGCTCTTATGAGAGATAATGACGAAACGGATACAATGGAAATGGCACATGACACAGGATTTTTGAACGTGGACGATGATGAAGTCGATGAAGATCATGAAGAAGACGATGGTATTCAAGAAGGTGATGAAACTCGTCTTCTAGAGAACAGTGGATGGTCTTCTCGTACCAGGGCTGTGGCGAAGTATCTCCAGACGATACTTGATAAAGAAGCTGAGAATGGGAAGAGTGGTGTTGTAGCAGACAAACTTTTAGCTGGGAAAACCCGTAAAGAAGCATCGAGGATGTTCTTTGAAACCCTGGTTTTGAAAACCAGAGATTATATCCAAGTTGAACAAGTTAAGCCCTACGAAAGCATCACCATCAAACCTCGACCAAAACTCACCAAATCCATCTTCTAG
Protein:  
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLLLGVVRIYSKKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFELPDSEIFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALELEEEVFQDKDLIGSDDEGVQGTDHNAYMDAATLEIKDDVVGVSEATPRDFNQEQVEDLAMRNEFNEDAQAPQTPGLVEVPNSSSVRDQLACDDQMEVDDLNAEEEEGRKASEELDANETHKPDQDLPSESPMEVDTSLIDEKSNAQNEPEEERAEHVHVTTSPCCSHITTEVEDPGQVVTEAGTDVNNVVADKSDAVPSVESSEVPTMNNAEQCLSQEPKDHGEENNHVAIATEVNQQTDSSIPDEQLNEAHATDEQLGNLTGSTDSDLPAPEKVLAAPERHGDETGFMVESTPDREDPGARNEDAGNNKITGKKRTFTESTITAESLNSVESVGLIQSKRTADSVPDDDDLLSSILVGKSSFLKMRSTPVLEIATTKLSRAAPRSTATKRKVLMDDPMVLHGDVIREQLTNTEGIRRVRKKAPCTIAEIVMLQRQAMEDGLLKEPILTGMSVELVSLHNEPFDLRGIRIIESDDRHASSVGPVEDNECAVRAVEENATEEVSAPQARPGGSEEQPAEALTHPQDQQEEAKEDDTELGETACELEASKEGDGAADEVNLVVNDQISQMPSEDKLDHVEDLQVEGYHEHHDGRLGGEDVCADLQEKSCSGGVIEITEGDADHNEILNETDLKVEVELPGEDKKTDASAEDCEIGIDDQTPRDNAVGSVETERLEEAGECSNLGLESFNEPLVEANNDGVNHNNYEPHNEMFNEEAYMQSARDAEALSGDALMRDNDETDTMEMAHDTGFLNVDDDEVDEDHEEDDGIQEGDETRLLENSGWSSRTRAVAKYLQTILDKEAENGKSGVVADKLLAGKTRKEASRMFFETLVLKTRDYIQVEQVKPYESITIKPRPKLTKSIF